3.01 "Into The Fire Part 2"
- Hathor captures O'Neill and implants him with a Goa'uld symbiote that could eventually kill him. Meanwhile, O'Neill's rescue party is defeated by Hathor's invincible energy barrier, and time is running out. Is there any way to save O'Neill?
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3.02 "Seth"
- When SG-1 hunts for a Goa'uld lord living on Earth, they discover this powerful alien in the form of a religious leader with a heavily armed cult following. O'Neill faces off with both government agents and the cult in a fiery clash that may destroy them all.
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3.03 "Fair Game"
- O'Neill attempts to stop a Goa'uld invasion of Earth. But to call off the attack, the Goa'uld lords demand the destruction of the Stargate. O'Neill doesn't trust them—but the fate of Earth lies in the balance.
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3.04 "Legacy"
- After Daniel begins to experience hallucinations, SGC doctors suspect that the number of trips through the Stargate may be limited. Daniel insists that something went wrong on SG-1's last mission, but no one believes him. With his condition worsening, will Daniel be able to convince them before he is permanently committed to a mental hospital?
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3.05 "Learning Curve"
- As part of an exchange program with the planet Orban, O'Neill travels to Earth with an alien girl who possesses incredible technical knowledge. But by the time O'Neill discovers the truth behind the child's superior mind…it may be too late for them all.
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3.06 "Point Of View"
- Alternate reality versions of Carter and Kawalsky are found in Area 51. Brought to Stargate Command, they start to deteriorate. However, return to their own reality means certain death, as their world has been invaded by Goa'ulds.
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3.07 "Deadman Switch"
- SG-1 is captured by Aris Boch, a bounty hunter chasing an evil Goa'uld named Kel'tar. He offers them freedom in exchange for their help. They agree, only to find that Kel'tar is in fact a Tok'ra, whose capture would endanger countless others.
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3.08 "Demons"
- SG-1 encounters a medieval civilization and frees a woman tied to a stake as a sacrifice to a demon. With the woman freed, the demon vows to destroy the village unless the SG-1 team is offered up in appeasement.
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3.09 "Rules Of Engagement"
- SG-1 lands in the middle of a blazing battle between Stargate soldiers and a Jaffa army. Believing the soldiers to be the missing-in-action SG-11 team, O'Neill and other others provide assistance…until the mystery team turns its weapons on SG-1.
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3.10 "Forever In A Day"
- During a rescue of captured Abydonians, Daniel finds his missing wife, Sha're. But instead of greeting him, she attacks him—leading to her death at the hands of Teal'c. Distraught over her death and angry at Teal'c, Daniel quits Stargate Command.
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3.11 "Past And Present"
- SG-1 encounters an entire planet suffering from amnesia. The planet's leader, a woman named Ke'ra, returns to Earth with SG-1 to find a cure. But even as Ke'ra and Daniel develop a mutual attraction, SG-1 suspects she may not be who she appears to be.
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3.12 "Jolinar's Memories Part 1"
- Carter's father has been captured on a moon transformed into a literal hell. As no one has ever escaped from hell except for Jolinar, Tok'ra technology is used to access Jolinar's memories from Carter's mind…but not before an old foe shows up to foil the rescue mission.
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3.13 "The Devil You Know Part 2"
- During an attempt to rescue Carter's father, SG-1 is caught by one of hell's denizens, determined to use the information they possess to overthrow the Goa'uld lord Sokar. Using Tok'ra technology, the team is forced to relive painful memories…but how much torture can they take?
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3.14 "Foothold"
- During routine medical exams, Dr. Fraiser injects each team member with a sedative, rendering them unconscious. Teal'c awakens and sees General Hammond conspiring with Fraiser and two aliens. What has happened at Stargate Command, and can SG-1 overpower its own "allies"?
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3.15 "Pretense"
- When SG-1 is invited to the Tollan planet to attend a ceremony called a "Triad," they are shocked to discover it is actually a trial to determine the fate of their old friend Skaara. Daniel and O'Neill must argue a case against a mysterious Goa'uld named Zipacna to save Skaara's personality.
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3.16 "Urgo"
- En route to a paradise planet, SG-1 is secretly implanted with an alien spore that evolves into a being called Urgo. Though Urgo claims to be friendly, the suspicious team members work feverishly to rid themselves of the creature before it destroys their minds.
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3.17 "A Hundred Days"
- SG-1 visits the friendly planet Edora and gathers to watch the annual meteor show that lights up the sky like a fiery rain. But suddenly, wayward asteroids bombard the planet, destroying the Stargate. Can O'Neill and the team ever return home?
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3.18 "Shades Of Grey"
- On a mission to Tollana, O'Neill steals a weapon and takes it back to Earth. When Hammond discovers the deception, he suspends O'Neill. But O'Neill's misconduct is only the beginning of a mystery that could have catastrophic consequences.
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3.19 "New Ground"
- Three quarters of SG-1 are captured upon arrival to a planet in the midst of a religious war. While Carter, Daniel, and O'Neill are tortured for information as they try to convince their Bedrosian captors they're not enemy spies, an injured Teal'c gets help from a Bedrosian scientist who may have his own agenda.
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3.20 "Maternal Instinct"
- Bra'tac arrives at Stargate Command with a wild story about interplanetary warfare with Apophis. Daniel deduces that the battle is over Apophis' child, Harsesis, and races to save the child before Apophis finds him first.
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3.21 "Crystal Skull"
- Daniel finds a glowing crystal skull identical to one first discovered by his grandfather decades before. When Daniel stares into the skull's eyes, a mysterious force makes him disappear. Now SG-1 must find Daniel's grandfather to unlock the mystery of the skull and bring Daniel back.
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3.22 "Nemesis Part 1"
- O'Neill is kidnapped by the Asgard and taken aboard a ship, where he encounters a swarm of metallic, buglike creatures on a mission to destroy Earth. O'Neill plans to blow up the ship and sacrifice himself, but can the Stargate team find another way to stop this apocalyptic scheme?
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